Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RXRBP28702 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RXRBP28702 ANKRD19P-201ENST00000338192 862 ntBASIC22.59■■□□□ 1.21
RXRBP28702 SPDYE19P-201ENST00000338590 713 ntBASIC22.59■■□□□ 1.21
RXRBP28702 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
RXRBP28702 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RXRBP28702 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC22.59■■□□□ 1.21
RXRBP28702 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RXRBP28702 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
RXRBP28702 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC22.59■■□□□ 1.21
RXRBP28702 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC22.59■■□□□ 1.21
RXRBP28702 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC22.59■■□□□ 1.21
RXRBP28702 RNA5SP423-201ENST00000517127 109 ntBASIC22.59■■□□□ 1.21
RXRBP28702 COG4-212ENST00000564653 590 ntTSL 5 BASIC22.59■■□□□ 1.21
RXRBP28702 NKG7-205ENST00000600427 520 ntTSL 3 BASIC22.59■■□□□ 1.21
RXRBP28702 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RXRBP28702 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RXRBP28702 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
RXRBP28702 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC22.59■■□□□ 1.21
RXRBP28702 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC22.59■■□□□ 1.21
RXRBP28702 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.59■■□□□ 1.21
RXRBP28702 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC22.58■■□□□ 1.21
RXRBP28702 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RXRBP28702 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.58■■□□□ 1.21
RXRBP28702 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RXRBP28702 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.58■■□□□ 1.21
RXRBP28702 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 BOLA2P3-201ENST00000404566 256 ntBASIC22.58■■□□□ 1.21
RXRBP28702 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC22.58■■□□□ 1.21
RXRBP28702 AC099548.2-209ENST00000480264 625 ntBASIC22.58■■□□□ 1.21
RXRBP28702 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RXRBP28702 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC22.58■■□□□ 1.21
RXRBP28702 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC22.58■■□□□ 1.21
RXRBP28702 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RXRBP28702 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC22.58■■□□□ 1.2
RXRBP28702 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RXRBP28702 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RXRBP28702 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RXRBP28702 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
RXRBP28702 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC22.57■■□□□ 1.2
RXRBP28702 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.57■■□□□ 1.2
RXRBP28702 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
RXRBP28702 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RXRBP28702 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.57■■□□□ 1.2
RXRBP28702 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC22.57■■□□□ 1.2
RXRBP28702 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RXRBP28702 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RXRBP28702 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RXRBP28702 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC22.57■■□□□ 1.2
RXRBP28702 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC22.57■■□□□ 1.2
RXRBP28702 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RXRBP28702 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC22.57■■□□□ 1.2
RXRBP28702 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC22.57■■□□□ 1.2
RXRBP28702 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC22.57■■□□□ 1.2
RXRBP28702 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RXRBP28702 TECR-220ENST00000600083 1204 ntTSL 2 BASIC22.57■■□□□ 1.2
RXRBP28702 AP3S2-216ENST00000617003 1561 ntBASIC22.57■■□□□ 1.2
RXRBP28702 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RXRBP28702 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RXRBP28702 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RXRBP28702 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RXRBP28702 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RXRBP28702 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RXRBP28702 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RXRBP28702 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RXRBP28702 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RXRBP28702 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.56■■□□□ 1.2
RXRBP28702 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RXRBP28702 HARS-201ENST00000307633 1780 ntTSL 2 BASIC22.56■■□□□ 1.2
RXRBP28702 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RXRBP28702 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC22.56■■□□□ 1.2
RXRBP28702 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RXRBP28702 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC22.56■■□□□ 1.2
RXRBP28702 BRWD1P1-201ENST00000401091 371 ntBASIC22.56■■□□□ 1.2
RXRBP28702 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RXRBP28702 CROCCP4-201ENST00000457096 498 ntBASIC22.56■■□□□ 1.2
RXRBP28702 DOC2GP-202ENST00000514950 1163 ntBASIC22.56■■□□□ 1.2
RXRBP28702 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC22.56■■□□□ 1.2
RXRBP28702 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.56■■□□□ 1.2
RXRBP28702 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RXRBP28702 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RXRBP28702 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.56■■□□□ 1.2
RXRBP28702 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RXRBP28702 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RXRBP28702 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RXRBP28702 BX276092.7-203ENST00000637198 1536 ntBASIC22.56■■□□□ 1.2
RXRBP28702 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RXRBP28702 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RXRBP28702 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.55■■□□□ 1.2
RXRBP28702 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms