Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACKR3P25106 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACKR3P25106 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACKR3P25106 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACKR3P25106 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.21■□□□□ 0.03
ACKR3P25106 LYSMD4-203ENST00000378904 2122 ntBASIC15.21■□□□□ 0.03
ACKR3P25106 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.21■□□□□ 0.03
ACKR3P25106 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ACKR3P25106 AL845331.1-201ENST00000424978 1190 ntBASIC15.21■□□□□ 0.03
ACKR3P25106 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ACKR3P25106 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ACKR3P25106 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACKR3P25106 GUSBP12-201ENST00000513727 720 ntBASIC15.21■□□□□ 0.03
ACKR3P25106 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.21■□□□□ 0.03
ACKR3P25106 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACKR3P25106 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.21■□□□□ 0.03
ACKR3P25106 AL592071.1-201ENST00000611956 408 ntBASIC15.21■□□□□ 0.03
ACKR3P25106 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.21■□□□□ 0.03
ACKR3P25106 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACKR3P25106 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ACKR3P25106 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.21■□□□□ 0.03
ACKR3P25106 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
ACKR3P25106 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.21■□□□□ 0.02
ACKR3P25106 AC018695.7-201ENST00000624587 2492 ntBASIC15.21■□□□□ 0.02
ACKR3P25106 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ACKR3P25106 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ACKR3P25106 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ACKR3P25106 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ACKR3P25106 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
ACKR3P25106 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ACKR3P25106 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.2■□□□□ 0.02
ACKR3P25106 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
ACKR3P25106 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.2■□□□□ 0.02
ACKR3P25106 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.2■□□□□ 0.02
ACKR3P25106 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.2■□□□□ 0.02
ACKR3P25106 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.2■□□□□ 0.02
ACKR3P25106 AC124864.1-201ENST00000623408 392 ntBASIC15.2■□□□□ 0.02
ACKR3P25106 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.2■□□□□ 0.02
ACKR3P25106 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ACKR3P25106 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.2■□□□□ 0.02
ACKR3P25106 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ACKR3P25106 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.2■□□□□ 0.02
ACKR3P25106 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ACKR3P25106 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.2■□□□□ 0.02
ACKR3P25106 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ACKR3P25106 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ACKR3P25106 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ACKR3P25106 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.19■□□□□ 0.02
ACKR3P25106 AC097374.2-201ENST00000618617 1306 ntBASIC15.19■□□□□ 0.02
ACKR3P25106 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ACKR3P25106 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ACKR3P25106 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ACKR3P25106 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.19■□□□□ 0.02
ACKR3P25106 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.19■□□□□ 0.02
ACKR3P25106 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.19■□□□□ 0.02
ACKR3P25106 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.19■□□□□ 0.02
ACKR3P25106 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 AL049597.2-201ENST00000565575 961 ntBASIC15.19■□□□□ 0.02
ACKR3P25106 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
ACKR3P25106 NTF6B-201ENST00000591913 560 ntBASIC15.19■□□□□ 0.02
ACKR3P25106 AL353801.3-201ENST00000609898 542 ntBASIC15.19■□□□□ 0.02
ACKR3P25106 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.19■□□□□ 0.02
ACKR3P25106 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.19■□□□□ 0.02
ACKR3P25106 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.19■□□□□ 0.02
ACKR3P25106 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ACKR3P25106 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ACKR3P25106 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms