Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.8□□□□□ -0.04
VAMP1P23763 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
VAMP1P23763 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.8□□□□□ -0.04
VAMP1P23763 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.8□□□□□ -0.04
VAMP1P23763 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VAMP1P23763 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
VAMP1P23763 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
VAMP1P23763 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
VAMP1P23763 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.79□□□□□ -0.04
VAMP1P23763 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.79□□□□□ -0.04
VAMP1P23763 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.79□□□□□ -0.04
VAMP1P23763 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
VAMP1P23763 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC14.79□□□□□ -0.04
VAMP1P23763 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.79□□□□□ -0.04
VAMP1P23763 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 HOXB1-202ENST00000577092 1414 ntBASIC14.79□□□□□ -0.04
VAMP1P23763 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.79□□□□□ -0.04
VAMP1P23763 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 AC008403.3-201ENST00000598924 454 ntBASIC14.79□□□□□ -0.04
VAMP1P23763 AL353708.3-201ENST00000610272 989 ntBASIC14.79□□□□□ -0.04
VAMP1P23763 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.79□□□□□ -0.04
VAMP1P23763 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.79□□□□□ -0.04
VAMP1P23763 AC133041.1-202ENST00000642053 222 ntBASIC14.79□□□□□ -0.04
VAMP1P23763 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.79□□□□□ -0.04
VAMP1P23763 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.79□□□□□ -0.04
VAMP1P23763 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.79□□□□□ -0.04
VAMP1P23763 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.79□□□□□ -0.04
VAMP1P23763 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAMP1P23763 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VAMP1P23763 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.78□□□□□ -0.04
VAMP1P23763 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 REXO1L11P-201ENST00000620964 1927 ntBASIC14.78□□□□□ -0.04
VAMP1P23763 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.78□□□□□ -0.04
VAMP1P23763 AC009949.1-201ENST00000623048 1830 ntBASIC14.78□□□□□ -0.04
VAMP1P23763 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.78□□□□□ -0.04
VAMP1P23763 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.78□□□□□ -0.04
VAMP1P23763 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.78□□□□□ -0.04
VAMP1P23763 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
VAMP1P23763 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.78□□□□□ -0.04
VAMP1P23763 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.78□□□□□ -0.04
VAMP1P23763 AC233263.1-201ENST00000578059 224 ntBASIC14.78□□□□□ -0.04
VAMP1P23763 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.78□□□□□ -0.04
VAMP1P23763 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.78□□□□□ -0.04
VAMP1P23763 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VAMP1P23763 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.78□□□□□ -0.04
VAMP1P23763 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAMP1P23763 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms