Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LBPP18428 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
LBPP18428 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LBPP18428 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LBPP18428 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
LBPP18428 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LBPP18428 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LBPP18428 AC105020.1-201ENST00000435356 2205 ntBASIC16.89■□□□□ 0.29
LBPP18428 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LBPP18428 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LBPP18428 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 AC046185.3-201ENST00000623228 1824 ntBASIC16.89■□□□□ 0.29
LBPP18428 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
LBPP18428 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LBPP18428 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.89■□□□□ 0.29
LBPP18428 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LBPP18428 SPDYE15P-201ENST00000424157 909 ntBASIC16.89■□□□□ 0.29
LBPP18428 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.89■□□□□ 0.29
LBPP18428 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 AL441883.1-201ENST00000566170 1045 ntBASIC16.89■□□□□ 0.29
LBPP18428 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LBPP18428 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.89■□□□□ 0.29
LBPP18428 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
LBPP18428 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.89■□□□□ 0.29
LBPP18428 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.89■□□□□ 0.29
LBPP18428 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.89■□□□□ 0.29
LBPP18428 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 PCDHA14-201ENST00000506751 2298 ntBASIC16.89■□□□□ 0.29
LBPP18428 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.89■□□□□ 0.29
LBPP18428 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBPP18428 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LBPP18428 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LBPP18428 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.88■□□□□ 0.29
LBPP18428 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.88■□□□□ 0.29
LBPP18428 AC005915.1-201ENST00000624912 2018 ntBASIC16.88■□□□□ 0.29
LBPP18428 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 STARP1-201ENST00000397973 869 ntBASIC16.88■□□□□ 0.29
LBPP18428 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.88■□□□□ 0.29
LBPP18428 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.88■□□□□ 0.29
LBPP18428 COX11P1-201ENST00000489116 835 ntBASIC16.88■□□□□ 0.29
LBPP18428 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LBPP18428 ZNF444P1-201ENST00000559497 298 ntBASIC16.88■□□□□ 0.29
LBPP18428 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.88■□□□□ 0.29
LBPP18428 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.88■□□□□ 0.29
LBPP18428 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LBPP18428 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.88■□□□□ 0.29
LBPP18428 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LBPP18428 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.88■□□□□ 0.29
LBPP18428 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.88■□□□□ 0.29
LBPP18428 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LBPP18428 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBPP18428 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBPP18428 AC093525.9-201ENST00000624961 1746 ntBASIC16.87■□□□□ 0.29
LBPP18428 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBPP18428 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LBPP18428 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.87■□□□□ 0.29
LBPP18428 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.87■□□□□ 0.29
LBPP18428 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBPP18428 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.87■□□□□ 0.29
LBPP18428 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.87■□□□□ 0.29
LBPP18428 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LBPP18428 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBPP18428 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms