Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
THRAP10827 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
THRAP10827 AC011676.5-201ENST00000624864 2660 ntBASIC17.57■□□□□ 0.4
THRAP10827 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
THRAP10827 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
THRAP10827 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.57■□□□□ 0.4
THRAP10827 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
THRAP10827 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.57■□□□□ 0.4
THRAP10827 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.57■□□□□ 0.4
THRAP10827 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
THRAP10827 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
THRAP10827 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.56■□□□□ 0.4
THRAP10827 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.56■□□□□ 0.4
THRAP10827 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
THRAP10827 AC099336.1-202ENST00000602961 463 ntBASIC17.56■□□□□ 0.4
THRAP10827 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
THRAP10827 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THRAP10827 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.55■□□□□ 0.4
THRAP10827 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.55■□□□□ 0.4
THRAP10827 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.55■□□□□ 0.4
THRAP10827 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
THRAP10827 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
THRAP10827 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
THRAP10827 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
THRAP10827 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.55■□□□□ 0.4
THRAP10827 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
THRAP10827 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.55■□□□□ 0.4
THRAP10827 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 AL031008.1-201ENST00000619963 541 ntBASIC17.55■□□□□ 0.4
THRAP10827 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.55■□□□□ 0.4
THRAP10827 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.55■□□□□ 0.4
THRAP10827 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.55■□□□□ 0.4
THRAP10827 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.55■□□□□ 0.4
THRAP10827 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THRAP10827 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
THRAP10827 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 AC093010.1-201ENST00000473625 1624 ntBASIC17.54■□□□□ 0.4
THRAP10827 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
THRAP10827 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
THRAP10827 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.54■□□□□ 0.4
THRAP10827 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
THRAP10827 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.54■□□□□ 0.4
THRAP10827 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THRAP10827 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.54■□□□□ 0.4
THRAP10827 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.54■□□□□ 0.4
THRAP10827 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.54■□□□□ 0.4
THRAP10827 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.54■□□□□ 0.4
THRAP10827 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms