Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 AC002558.1-201ENST00000488906 803 ntBASIC18.93■□□□□ 0.62
CCDC172P0C7W6 AC063952.2-201ENST00000498792 1227 ntBASIC18.93■□□□□ 0.62
CCDC172P0C7W6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 COX5BP2-201ENST00000392354 334 ntBASIC18.92■□□□□ 0.62
CCDC172P0C7W6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 VENTXP5-201ENST00000523979 775 ntBASIC18.92■□□□□ 0.62
CCDC172P0C7W6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 LYSMD4-203ENST00000378904 2122 ntBASIC18.92■□□□□ 0.62
CCDC172P0C7W6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC172P0C7W6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 MYCLP1-201ENST00000372451 1075 ntBASIC18.91■□□□□ 0.62
CCDC172P0C7W6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 AL139327.4-201ENST00000612362 153 ntBASIC18.91■□□□□ 0.62
CCDC172P0C7W6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 AL121761.2-201ENST00000598007 1648 ntBASIC18.91■□□□□ 0.62
CCDC172P0C7W6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms