Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CICP13-201ENST00000422015 2789 ntBASIC13.58□□□□□ -0.24
CXCL1P09341 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCL1P09341 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCL1P09341 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CXCL1P09341 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCL1P09341 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
CXCL1P09341 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCL1P09341 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CXCL1P09341 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCL1P09341 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CXCL1P09341 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.58□□□□□ -0.24
CXCL1P09341 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.58□□□□□ -0.24
CXCL1P09341 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.58□□□□□ -0.24
CXCL1P09341 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCL1P09341 AL109659.2-201ENST00000606809 1674 ntBASIC13.58□□□□□ -0.24
CXCL1P09341 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CXCL1P09341 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 TNRC18P2-201ENST00000417666 2714 ntBASIC13.58□□□□□ -0.24
CXCL1P09341 AL009178.2-201ENST00000597278 2719 ntBASIC13.58□□□□□ -0.24
CXCL1P09341 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CXCL1P09341 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.58□□□□□ -0.24
CXCL1P09341 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CXCL1P09341 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.58□□□□□ -0.24
CXCL1P09341 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CXCL1P09341 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.58□□□□□ -0.24
CXCL1P09341 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCL1P09341 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.58□□□□□ -0.24
CXCL1P09341 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CXCL1P09341 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL1P09341 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CXCL1P09341 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL1P09341 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.57□□□□□ -0.24
CXCL1P09341 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.57□□□□□ -0.24
CXCL1P09341 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CXCL1P09341 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL1P09341 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CXCL1P09341 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL1P09341 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CXCL1P09341 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.57□□□□□ -0.24
CXCL1P09341 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL1P09341 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.57□□□□□ -0.24
CXCL1P09341 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL1P09341 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CXCL1P09341 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL1P09341 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL1P09341 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.57□□□□□ -0.24
CXCL1P09341 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL1P09341 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.56□□□□□ -0.24
CXCL1P09341 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL1P09341 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL1P09341 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL1P09341 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCL1P09341 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL1P09341 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL1P09341 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL1P09341 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL1P09341 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL1P09341 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms