Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HLA-DQB2P05538 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HLA-DQB2P05538 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HLA-DQB2P05538 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 AKR1C7P-201ENST00000305623 895 ntBASIC17.7■□□□□ 0.42
HLA-DQB2P05538 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 DUSP5P1-201ENST00000441325 1139 ntBASIC17.7■□□□□ 0.42
HLA-DQB2P05538 AC106795.1-205ENST00000512851 1056 ntBASIC17.7■□□□□ 0.42
HLA-DQB2P05538 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 AL135999.2-201ENST00000622438 1686 ntBASIC17.7■□□□□ 0.42
HLA-DQB2P05538 AC116353.5-201ENST00000638148 1699 ntBASIC17.7■□□□□ 0.42
HLA-DQB2P05538 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB2P05538 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 AC012313.1-201ENST00000593393 3059 ntBASIC17.69■□□□□ 0.42
HLA-DQB2P05538 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 AL020989.1-201ENST00000422979 469 ntBASIC17.69■□□□□ 0.42
HLA-DQB2P05538 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 IFNL4P1-201ENST00000607083 540 ntBASIC17.69■□□□□ 0.42
HLA-DQB2P05538 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 LTB4R2-202ENST00000528054 3092 ntBASIC17.69■□□□□ 0.42
HLA-DQB2P05538 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB2P05538 AC079776.2-201ENST00000641154 1609 ntBASIC17.69■□□□□ 0.42
HLA-DQB2P05538 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB2P05538 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms