Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.71□□□□□ -0.06
CD74P04233 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.71□□□□□ -0.06
CD74P04233 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CD74P04233 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CD74P04233 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.7□□□□□ -0.06
CD74P04233 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CD74P04233 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CD74P04233 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.7□□□□□ -0.06
CD74P04233 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CD74P04233 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CD74P04233 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CD74P04233 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CD74P04233 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.7□□□□□ -0.06
CD74P04233 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CD74P04233 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 AC128676.1-201ENST00000454392 318 ntBASIC14.7□□□□□ -0.06
CD74P04233 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.7□□□□□ -0.06
CD74P04233 REXO1L10P-201ENST00000615707 1290 ntBASIC14.7□□□□□ -0.06
CD74P04233 REXO1L12P-201ENST00000622156 912 ntBASIC14.7□□□□□ -0.06
CD74P04233 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CD74P04233 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.7□□□□□ -0.06
CD74P04233 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.7□□□□□ -0.06
CD74P04233 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD74P04233 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.7□□□□□ -0.06
CD74P04233 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.7□□□□□ -0.06
CD74P04233 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.69□□□□□ -0.06
CD74P04233 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CD74P04233 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.69□□□□□ -0.06
CD74P04233 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.69□□□□□ -0.06
CD74P04233 CCR12P-201ENST00000446203 998 ntBASIC14.69□□□□□ -0.06
CD74P04233 AC002558.1-201ENST00000488906 803 ntBASIC14.69□□□□□ -0.06
CD74P04233 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.69□□□□□ -0.06
CD74P04233 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.69□□□□□ -0.06
CD74P04233 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.69□□□□□ -0.06
CD74P04233 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CD74P04233 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CD74P04233 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CD74P04233 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CD74P04233 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 KRT89P-201ENST00000620027 1478 ntBASIC14.69□□□□□ -0.06
CD74P04233 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CD74P04233 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD74P04233 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.68□□□□□ -0.06
CD74P04233 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CD74P04233 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.68□□□□□ -0.06
CD74P04233 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CD74P04233 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.68□□□□□ -0.06
CD74P04233 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.68□□□□□ -0.06
CD74P04233 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.68□□□□□ -0.06
CD74P04233 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.68□□□□□ -0.06
CD74P04233 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.68□□□□□ -0.06
CD74P04233 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.68□□□□□ -0.06
CD74P04233 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.68□□□□□ -0.06
CD74P04233 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.68□□□□□ -0.06
CD74P04233 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms