Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CHRNA1P02708 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHRNA1P02708 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 AL139400.1-201ENST00000366220 510 ntBASIC18.89■□□□□ 0.61
CHRNA1P02708 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA1P02708 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.89■□□□□ 0.61
CHRNA1P02708 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 AP000344.2-201ENST00000512987 629 ntBASIC18.89■□□□□ 0.61
CHRNA1P02708 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHRNA1P02708 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.89■□□□□ 0.61
CHRNA1P02708 AC068137.2-201ENST00000605408 478 ntBASIC18.89■□□□□ 0.61
CHRNA1P02708 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.89■□□□□ 0.61
CHRNA1P02708 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.89■□□□□ 0.61
CHRNA1P02708 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA1P02708 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA1P02708 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CHRNA1P02708 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA1P02708 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA1P02708 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA1P02708 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 ABALON-201ENST00000629058 1903 ntBASIC18.88■□□□□ 0.61
CHRNA1P02708 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNA1P02708 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA1P02708 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHRNA1P02708 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.88■□□□□ 0.61
CHRNA1P02708 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 AL513480.1-201ENST00000451731 511 ntBASIC18.88■□□□□ 0.61
CHRNA1P02708 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CHRNA1P02708 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.88■□□□□ 0.61
CHRNA1P02708 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
CHRNA1P02708 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.88■□□□□ 0.61
CHRNA1P02708 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.88■□□□□ 0.61
CHRNA1P02708 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CHRNA1P02708 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA1P02708 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 LINC01451-201ENST00000623792 534 ntBASIC18.88■□□□□ 0.61
CHRNA1P02708 AL513210.1-201ENST00000629608 234 ntBASIC18.88■□□□□ 0.61
CHRNA1P02708 AC105339.1-204ENST00000636249 355 ntBASIC18.88■□□□□ 0.61
CHRNA1P02708 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNA1P02708 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNA1P02708 AC006116.8-202ENST00000587620 1550 ntBASIC18.88■□□□□ 0.61
CHRNA1P02708 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNA1P02708 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNA1P02708 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA1P02708 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNA1P02708 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 AC087163.2-201ENST00000457299 853 ntBASIC18.87■□□□□ 0.61
CHRNA1P02708 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHRNA1P02708 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 BICD1-207ENST00000551848 1962 ntBASIC18.87■□□□□ 0.61
CHRNA1P02708 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNA1P02708 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA1P02708 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CHRNA1P02708 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA1P02708 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CHRNA1P02708 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA1P02708 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.86■□□□□ 0.61
CHRNA1P02708 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.86■□□□□ 0.61
CHRNA1P02708 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA1P02708 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA1P02708 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CHRNA1P02708 AC004461.1-201ENST00000412461 403 ntBASIC18.86■□□□□ 0.61
CHRNA1P02708 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA1P02708 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms