Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.04□□□□□ -0.16
APOC3P02656 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
APOC3P02656 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
APOC3P02656 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.04□□□□□ -0.16
APOC3P02656 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.04□□□□□ -0.16
APOC3P02656 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC3P02656 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC3P02656 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.04□□□□□ -0.16
APOC3P02656 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC3P02656 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 MIR4449-201ENST00000578365 66 ntBASIC14.04□□□□□ -0.16
APOC3P02656 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
APOC3P02656 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
APOC3P02656 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.04□□□□□ -0.16
APOC3P02656 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 AC015656.1-201ENST00000624209 3578 ntBASIC14.04□□□□□ -0.16
APOC3P02656 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.04□□□□□ -0.16
APOC3P02656 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.04□□□□□ -0.16
APOC3P02656 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 AC126335.2-201ENST00000623362 4637 ntBASIC14.03□□□□□ -0.16
APOC3P02656 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.03□□□□□ -0.16
APOC3P02656 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.03□□□□□ -0.16
APOC3P02656 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
APOC3P02656 AC013268.4-201ENST00000637413 2228 ntBASIC14.03□□□□□ -0.16
APOC3P02656 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.03□□□□□ -0.16
APOC3P02656 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.03□□□□□ -0.16
APOC3P02656 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
APOC3P02656 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
APOC3P02656 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 SLC7A5P1-201ENST00000568957 537 ntBASIC14.03□□□□□ -0.16
APOC3P02656 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.03□□□□□ -0.16
APOC3P02656 AL356740.2-201ENST00000601559 647 ntBASIC14.03□□□□□ -0.16
APOC3P02656 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.03□□□□□ -0.16
APOC3P02656 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.03□□□□□ -0.16
APOC3P02656 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.03□□□□□ -0.16
APOC3P02656 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.03□□□□□ -0.16
APOC3P02656 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.03□□□□□ -0.16
APOC3P02656 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC3P02656 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
APOC3P02656 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
APOC3P02656 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.02□□□□□ -0.16
APOC3P02656 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.02□□□□□ -0.16
APOC3P02656 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.02□□□□□ -0.16
APOC3P02656 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.02□□□□□ -0.16
APOC3P02656 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOC3P02656 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 KRT18P20-201ENST00000548986 1279 ntBASIC14.02□□□□□ -0.17
APOC3P02656 AC105020.6-201ENST00000621523 1217 ntBASIC14.02□□□□□ -0.17
APOC3P02656 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
APOC3P02656 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms