Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.86□□□□□ -0.19
IFNA1P01562 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.86□□□□□ -0.19
IFNA1P01562 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.86□□□□□ -0.19
IFNA1P01562 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.86□□□□□ -0.19
IFNA1P01562 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.86□□□□□ -0.19
IFNA1P01562 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.86□□□□□ -0.19
IFNA1P01562 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.86□□□□□ -0.19
IFNA1P01562 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.86□□□□□ -0.19
IFNA1P01562 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IFNA1P01562 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.86□□□□□ -0.19
IFNA1P01562 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.86□□□□□ -0.19
IFNA1P01562 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.86□□□□□ -0.19
IFNA1P01562 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.86□□□□□ -0.19
IFNA1P01562 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
IFNA1P01562 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
IFNA1P01562 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IFNA1P01562 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.86□□□□□ -0.19
IFNA1P01562 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IFNA1P01562 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IFNA1P01562 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.85□□□□□ -0.19
IFNA1P01562 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.85□□□□□ -0.19
IFNA1P01562 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
IFNA1P01562 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
IFNA1P01562 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.85□□□□□ -0.19
IFNA1P01562 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.85□□□□□ -0.19
IFNA1P01562 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
IFNA1P01562 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
IFNA1P01562 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.85□□□□□ -0.19
IFNA1P01562 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.85□□□□□ -0.19
IFNA1P01562 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.85□□□□□ -0.19
IFNA1P01562 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.85□□□□□ -0.19
IFNA1P01562 PNMA6B-201ENST00000538162 1200 ntBASIC13.85□□□□□ -0.19
IFNA1P01562 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.85□□□□□ -0.19
IFNA1P01562 AC008687.6-201ENST00000596318 630 ntBASIC13.85□□□□□ -0.19
IFNA1P01562 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
IFNA1P01562 AC092118.2-201ENST00000613495 667 ntBASIC13.85□□□□□ -0.19
IFNA1P01562 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.85□□□□□ -0.19
IFNA1P01562 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
IFNA1P01562 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.85□□□□□ -0.19
IFNA1P01562 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.85□□□□□ -0.19
IFNA1P01562 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
IFNA1P01562 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
IFNA1P01562 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
IFNA1P01562 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
IFNA1P01562 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 AC105917.1-201ENST00000506637 2539 ntBASIC13.85□□□□□ -0.19
IFNA1P01562 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IFNA1P01562 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
IFNA1P01562 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
IFNA1P01562 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms