Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GPC4O75487 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.55■□□□□ 0.4
GPC4O75487 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GPC4O75487 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
GPC4O75487 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.55■□□□□ 0.4
GPC4O75487 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GPC4O75487 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
GPC4O75487 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.54■□□□□ 0.4
GPC4O75487 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.54■□□□□ 0.4
GPC4O75487 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.54■□□□□ 0.4
GPC4O75487 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GPC4O75487 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GPC4O75487 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
GPC4O75487 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
GPC4O75487 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.54■□□□□ 0.4
GPC4O75487 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.54■□□□□ 0.4
GPC4O75487 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC4O75487 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GPC4O75487 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
GPC4O75487 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.53■□□□□ 0.4
GPC4O75487 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GPC4O75487 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GPC4O75487 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GPC4O75487 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC4O75487 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
GPC4O75487 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
GPC4O75487 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC4O75487 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC4O75487 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.52■□□□□ 0.4
GPC4O75487 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.52■□□□□ 0.4
GPC4O75487 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 NPAP1P7-201ENST00000613027 823 ntBASIC17.52■□□□□ 0.4
GPC4O75487 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.52■□□□□ 0.4
GPC4O75487 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
GPC4O75487 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms