Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.76■□□□□ 0.43
RIPK2O43353 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.76■□□□□ 0.43
RIPK2O43353 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.76■□□□□ 0.43
RIPK2O43353 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.76■□□□□ 0.43
RIPK2O43353 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RIPK2O43353 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 AC002558.1-201ENST00000488906 803 ntBASIC17.76■□□□□ 0.43
RIPK2O43353 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.76■□□□□ 0.43
RIPK2O43353 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.76■□□□□ 0.43
RIPK2O43353 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.76■□□□□ 0.43
RIPK2O43353 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RIPK2O43353 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RIPK2O43353 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.75■□□□□ 0.43
RIPK2O43353 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.75■□□□□ 0.43
RIPK2O43353 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RIPK2O43353 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.75■□□□□ 0.43
RIPK2O43353 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
RIPK2O43353 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RIPK2O43353 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
RIPK2O43353 TSPY7P-201ENST00000431358 1114 ntBASIC17.75■□□□□ 0.43
RIPK2O43353 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.75■□□□□ 0.43
RIPK2O43353 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
RIPK2O43353 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.75■□□□□ 0.43
RIPK2O43353 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.75■□□□□ 0.43
RIPK2O43353 MIR4785-201ENST00000585005 73 ntBASIC17.75■□□□□ 0.43
RIPK2O43353 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.75■□□□□ 0.43
RIPK2O43353 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RIPK2O43353 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RIPK2O43353 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RIPK2O43353 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RIPK2O43353 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
RIPK2O43353 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
RIPK2O43353 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.75■□□□□ 0.43
RIPK2O43353 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RIPK2O43353 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.75■□□□□ 0.43
RIPK2O43353 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.75■□□□□ 0.43
RIPK2O43353 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RIPK2O43353 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
RIPK2O43353 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.75■□□□□ 0.43
RIPK2O43353 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.75■□□□□ 0.43
RIPK2O43353 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.74■□□□□ 0.43
RIPK2O43353 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RIPK2O43353 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RIPK2O43353 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RIPK2O43353 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RIPK2O43353 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.74■□□□□ 0.43
RIPK2O43353 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RIPK2O43353 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.74■□□□□ 0.43
RIPK2O43353 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.74■□□□□ 0.43
RIPK2O43353 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 TSPY12P-201ENST00000421279 868 ntBASIC17.74■□□□□ 0.43
RIPK2O43353 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.74■□□□□ 0.43
RIPK2O43353 TSPY20P-201ENST00000450910 630 ntBASIC17.74■□□□□ 0.43
RIPK2O43353 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RIPK2O43353 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.74■□□□□ 0.43
RIPK2O43353 FAM87A-204ENST00000613235 858 ntBASIC17.74■□□□□ 0.43
RIPK2O43353 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.74■□□□□ 0.43
RIPK2O43353 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.74■□□□□ 0.43
RIPK2O43353 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.74■□□□□ 0.43
RIPK2O43353 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.74■□□□□ 0.43
RIPK2O43353 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIPK2O43353 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.73■□□□□ 0.43
RIPK2O43353 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 KRT8P9-201ENST00000558927 1449 ntBASIC17.73■□□□□ 0.43
RIPK2O43353 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms