Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PHGDHO43175 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PHGDHO43175 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PHGDHO43175 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PHGDHO43175 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.4■□□□□ 0.38
PHGDHO43175 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 AC116353.5-201ENST00000638148 1699 ntBASIC17.4■□□□□ 0.38
PHGDHO43175 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 AC106886.4-201ENST00000623557 2502 ntBASIC17.4■□□□□ 0.38
PHGDHO43175 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.4■□□□□ 0.38
PHGDHO43175 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.4■□□□□ 0.38
PHGDHO43175 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.4■□□□□ 0.38
PHGDHO43175 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PHGDHO43175 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PHGDHO43175 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PHGDHO43175 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.4■□□□□ 0.38
PHGDHO43175 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.4■□□□□ 0.38
PHGDHO43175 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.4■□□□□ 0.38
PHGDHO43175 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.4■□□□□ 0.38
PHGDHO43175 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.4■□□□□ 0.38
PHGDHO43175 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
PHGDHO43175 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PHGDHO43175 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.4■□□□□ 0.38
PHGDHO43175 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.4■□□□□ 0.38
PHGDHO43175 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHGDHO43175 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
PHGDHO43175 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PHGDHO43175 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PHGDHO43175 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PHGDHO43175 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
PHGDHO43175 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.39■□□□□ 0.37
PHGDHO43175 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.39■□□□□ 0.37
PHGDHO43175 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.39■□□□□ 0.37
PHGDHO43175 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 COX5BP2-201ENST00000392354 334 ntBASIC17.39■□□□□ 0.37
PHGDHO43175 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.39■□□□□ 0.37
PHGDHO43175 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.39■□□□□ 0.37
PHGDHO43175 AC022616.7-201ENST00000525383 220 ntBASIC17.39■□□□□ 0.37
PHGDHO43175 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.39■□□□□ 0.37
PHGDHO43175 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.39■□□□□ 0.37
PHGDHO43175 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.39■□□□□ 0.37
PHGDHO43175 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PHGDHO43175 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PHGDHO43175 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PHGDHO43175 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.39■□□□□ 0.37
PHGDHO43175 AC124067.4-201ENST00000519691 2379 ntBASIC17.39■□□□□ 0.37
PHGDHO43175 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PHGDHO43175 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHGDHO43175 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
PHGDHO43175 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.38■□□□□ 0.37
PHGDHO43175 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.38■□□□□ 0.37
PHGDHO43175 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.38■□□□□ 0.37
PHGDHO43175 AL645929.1-201ENST00000420084 975 ntBASIC17.38■□□□□ 0.37
PHGDHO43175 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.38■□□□□ 0.37
PHGDHO43175 AL671277.2-201ENST00000458060 996 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms