Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP2A1O14983 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP2A1O14983 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP2A1O14983 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
ATP2A1O14983 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.94■□□□□ 0.78
ATP2A1O14983 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.94■□□□□ 0.78
ATP2A1O14983 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP2A1O14983 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP2A1O14983 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP2A1O14983 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP2A1O14983 C20orf181-201ENST00000623918 480 ntBASIC19.94■□□□□ 0.78
ATP2A1O14983 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP2A1O14983 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
ATP2A1O14983 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 AC009113.1-201ENST00000570267 2443 ntBASIC19.94■□□□□ 0.78
ATP2A1O14983 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A1O14983 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP2A1O14983 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP2A1O14983 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A1O14983 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ATP2A1O14983 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP2A1O14983 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP2A1O14983 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP2A1O14983 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ATP2A1O14983 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A1O14983 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP2A1O14983 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ATP2A1O14983 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ATP2A1O14983 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A1O14983 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A1O14983 AC211486.1-202ENST00000416371 468 ntBASIC19.93■□□□□ 0.78
ATP2A1O14983 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
ATP2A1O14983 MKNK2P1-201ENST00000437526 628 ntBASIC19.93■□□□□ 0.78
ATP2A1O14983 AC211476.1-201ENST00000503899 468 ntBASIC19.93■□□□□ 0.78
ATP2A1O14983 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.93■□□□□ 0.78
ATP2A1O14983 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP2A1O14983 AL513190.1-201ENST00000621254 727 ntBASIC19.93■□□□□ 0.78
ATP2A1O14983 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A1O14983 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A1O14983 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A1O14983 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A1O14983 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A1O14983 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP2A1O14983 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A1O14983 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ATP2A1O14983 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP2A1O14983 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ATP2A1O14983 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.92■□□□□ 0.78
ATP2A1O14983 DNAJB3-202ENST00000449667 1266 ntBASIC19.92■□□□□ 0.78
ATP2A1O14983 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ATP2A1O14983 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP2A1O14983 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP2A1O14983 AC010507.1-201ENST00000633895 436 ntBASIC19.92■□□□□ 0.78
ATP2A1O14983 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A1O14983 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ATP2A1O14983 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ATP2A1O14983 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms