Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLDN4O14493 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN4O14493 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN4O14493 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN4O14493 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN4O14493 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN4O14493 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CLDN4O14493 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN4O14493 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CLDN4O14493 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLDN4O14493 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN4O14493 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN4O14493 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN4O14493 AL020989.1-201ENST00000422979 469 ntBASIC16.47■□□□□ 0.23
CLDN4O14493 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN4O14493 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CLDN4O14493 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN4O14493 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN4O14493 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN4O14493 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN4O14493 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.47■□□□□ 0.23
CLDN4O14493 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CLDN4O14493 AL139327.4-201ENST00000612362 153 ntBASIC16.47■□□□□ 0.23
CLDN4O14493 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN4O14493 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN4O14493 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.47■□□□□ 0.23
CLDN4O14493 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN4O14493 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN4O14493 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN4O14493 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN4O14493 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CLDN4O14493 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CLDN4O14493 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN4O14493 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN4O14493 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN4O14493 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN4O14493 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN4O14493 SIGLEC30P-201ENST00000455569 941 ntBASIC16.46■□□□□ 0.23
CLDN4O14493 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN4O14493 EMBP1-201ENST00000458200 901 ntBASIC16.46■□□□□ 0.23
CLDN4O14493 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN4O14493 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 AL139288.1-201ENST00000623748 933 ntBASIC16.46■□□□□ 0.23
CLDN4O14493 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CLDN4O14493 AC132938.5-201ENST00000624980 1813 ntBASIC16.46■□□□□ 0.23
CLDN4O14493 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN4O14493 AL356309.3-201ENST00000624132 1934 ntBASIC16.46■□□□□ 0.23
CLDN4O14493 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CLDN4O14493 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CLDN4O14493 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CLDN4O14493 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN4O14493 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
CLDN4O14493 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN4O14493 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.22
CLDN4O14493 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN4O14493 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN4O14493 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CLDN4O14493 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLDN4O14493 AKR1C7P-201ENST00000305623 895 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms