Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FOXN3O00409 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXN3O00409 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FOXN3O00409 AC132938.5-201ENST00000624980 1813 ntBASIC18.7■□□□□ 0.58
FOXN3O00409 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
FOXN3O00409 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 ATP5G2P1-201ENST00000433580 426 ntBASIC18.7■□□□□ 0.58
FOXN3O00409 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.7■□□□□ 0.58
FOXN3O00409 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.7■□□□□ 0.58
FOXN3O00409 AP000867.3-201ENST00000524675 377 ntBASIC18.7■□□□□ 0.58
FOXN3O00409 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.7■□□□□ 0.58
FOXN3O00409 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 AC074051.2-201ENST00000565115 352 ntBASIC18.7■□□□□ 0.58
FOXN3O00409 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
FOXN3O00409 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.7■□□□□ 0.58
FOXN3O00409 AC092119.3-201ENST00000612618 583 ntBASIC18.7■□□□□ 0.58
FOXN3O00409 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FOXN3O00409 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
FOXN3O00409 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
FOXN3O00409 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
FOXN3O00409 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 AC093525.9-201ENST00000624961 1746 ntBASIC18.69■□□□□ 0.58
FOXN3O00409 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
FOXN3O00409 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
FOXN3O00409 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
FOXN3O00409 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXN3O00409 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
FOXN3O00409 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
FOXN3O00409 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
FOXN3O00409 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.69■□□□□ 0.58
FOXN3O00409 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXN3O00409 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.69■□□□□ 0.58
FOXN3O00409 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.69■□□□□ 0.58
FOXN3O00409 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.69■□□□□ 0.58
FOXN3O00409 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXN3O00409 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
FOXN3O00409 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN3O00409 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FOXN3O00409 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.68■□□□□ 0.58
FOXN3O00409 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXN3O00409 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 AC060834.1-201ENST00000443027 2032 ntBASIC18.68■□□□□ 0.58
FOXN3O00409 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
FOXN3O00409 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXN3O00409 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.68■□□□□ 0.58
FOXN3O00409 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
FOXN3O00409 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
FOXN3O00409 AC096582.2-201ENST00000510860 516 ntBASIC18.68■□□□□ 0.58
FOXN3O00409 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.68■□□□□ 0.58
FOXN3O00409 AC092329.2-201ENST00000598402 547 ntBASIC18.68■□□□□ 0.58
FOXN3O00409 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN3O00409 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms