Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 AC104640.1-201ENST00000562617 2109 ntBASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.09□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
TMEM256-PLSCR3K7ERE1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC116353.5-201ENST00000638148 1699 ntBASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 LYSMD4-203ENST00000378904 2122 ntBASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC079328.2-201ENST00000561241 3354 ntBASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC142381.2-201ENST00000566120 298 ntBASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 C1QL1P1-201ENST00000568105 661 ntBASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PAUPAR-201ENST00000630360 2965 ntBASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms