Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RGPD3A6NKT7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RGPD3A6NKT7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
RGPD3A6NKT7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.83■■□□□ 1.08
RGPD3A6NKT7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
RGPD3A6NKT7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RGPD3A6NKT7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
RGPD3A6NKT7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 RN7SL837P-201ENST00000463010 287 ntBASIC21.82■■□□□ 1.08
RGPD3A6NKT7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 FOXO1B-201ENST00000504678 1527 ntBASIC21.82■■□□□ 1.08
RGPD3A6NKT7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 FAM86MP-201ENST00000340703 885 ntBASIC21.82■■□□□ 1.08
RGPD3A6NKT7 AL353779.1-201ENST00000434793 351 ntBASIC21.82■■□□□ 1.08
RGPD3A6NKT7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 SNX29P1-201ENST00000548357 1007 ntBASIC21.82■■□□□ 1.08
RGPD3A6NKT7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.82■■□□□ 1.08
RGPD3A6NKT7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 KRT17P8-201ENST00000540749 863 ntBASIC21.81■■□□□ 1.08
RGPD3A6NKT7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 AC018529.1-201ENST00000613063 361 ntBASIC21.81■■□□□ 1.08
RGPD3A6NKT7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.81■■□□□ 1.08
RGPD3A6NKT7 AL133338.1-201ENST00000565695 1517 ntBASIC21.81■■□□□ 1.08
RGPD3A6NKT7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 AC007431.3-201ENST00000623221 587 ntBASIC21.8■■□□□ 1.08
RGPD3A6NKT7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 AL096828.2-201ENST00000567259 1965 ntBASIC21.8■■□□□ 1.08
RGPD3A6NKT7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.8■■□□□ 1.08
RGPD3A6NKT7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 BANF1P1-201ENST00000553684 263 ntBASIC21.79■■□□□ 1.08
RGPD3A6NKT7 RAB43P1-201ENST00000561790 589 ntBASIC21.79■■□□□ 1.08
RGPD3A6NKT7 AC009407.1-201ENST00000568958 598 ntBASIC21.79■■□□□ 1.08
RGPD3A6NKT7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 AC016027.1-202ENST00000607927 1699 ntBASIC21.79■■□□□ 1.08
RGPD3A6NKT7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 TTTY23B-201ENST00000442790 549 ntBASIC21.79■■□□□ 1.08
RGPD3A6NKT7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RGPD3A6NKT7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RGPD3A6NKT7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.78■■□□□ 1.08
RGPD3A6NKT7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.78■■□□□ 1.08
RGPD3A6NKT7 AC087499.5-201ENST00000452760 1342 ntBASIC21.78■■□□□ 1.08
RGPD3A6NKT7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RGPD3A6NKT7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms