Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 RPSAP43-201ENST00000402237 625 ntBASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 LINC00982-205ENST00000420957 435 ntBASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 KRT18P2-201ENST00000447938 1258 ntBASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 AC112482.1-201ENST00000492080 688 ntBASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 IGHV3-65-201ENST00000523210 341 ntBASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 AC008667.4-201ENST00000607370 168 ntBASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 AC055717.3-201ENST00000622967 595 ntBASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 AC004790.2-201ENST00000623588 572 ntBASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 AC004832.2-201ENST00000426397 482 ntBASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 GPX1P2-201ENST00000429271 606 ntBASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3FA6NER0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 PTCHD3P3-201ENST00000403073 906 ntBASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 VN2R19P-201ENST00000442399 1052 ntBASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 MTDHP5-201ENST00000598980 586 ntBASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms