Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC022898.2-201ENST00000616822 1312 ntBASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TCRBV4S1A1TA0A5B7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
TCRBV4S1A1TA0A5B7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC091607.1-201ENST00000490318 1060 ntBASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC080080.1-201ENST00000625121 2420 ntBASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC096582.2-201ENST00000510860 516 ntBASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AP005901.3-202ENST00000581653 237 ntBASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV4S1A1TA0A5B7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PCDHA12-202ENST00000613593 2588 ntBASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms