Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 AP005242.2-201ENST00000580065 1175 ntBASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.38■□□□□ 0.05
TRDV1A0A1B0GX56 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 AC103702.1-201ENST00000548801 2630 ntBASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 AC092338.2-201ENST00000568827 1415 ntBASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 AL135905.2-201ENST00000584934 1404 ntBASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 PVRIG2P-201ENST00000435460 978 ntBASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 BX088651.1-201ENST00000540551 451 ntBASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms