Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 AC046185.3-201ENST00000623228 1824 ntBASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV5A0A0B4J249 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 CYP2D8P-201ENST00000433633 1490 ntBASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 AC046158.3-201ENST00000624947 2558 ntBASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 MIR4785-201ENST00000585005 73 ntBASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV5A0A0B4J249 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 AC128688.1-201ENST00000487626 519 ntBASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV5A0A0B4J249 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 BX276092.7-203ENST00000637198 1536 ntBASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms