Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 AC090192.1-201ENST00000517740 490 ntBASIC15.07■□□□□ 0
TRAV18A0A075B6X5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.06■□□□□ 0
TRAV18A0A075B6X5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 BX088651.1-201ENST00000540551 451 ntBASIC15.06■□□□□ 0
TRAV18A0A075B6X5 AP005242.2-201ENST00000580065 1175 ntBASIC15.06■□□□□ 0
TRAV18A0A075B6X5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 REXO1L10P-201ENST00000615707 1290 ntBASIC15.06■□□□□ 0
TRAV18A0A075B6X5 REXO1L12P-201ENST00000622156 912 ntBASIC15.06■□□□□ 0
TRAV18A0A075B6X5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 KRT8P47-201ENST00000604727 1398 ntBASIC15.06■□□□□ 0
TRAV18A0A075B6X5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV18A0A075B6X5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.05■□□□□ 0
TRAV18A0A075B6X5 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRAV18A0A075B6X5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV18A0A075B6X5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV18A0A075B6X5 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 AC046185.3-201ENST00000623228 1824 ntBASIC15.05■□□□□ -0
TRAV18A0A075B6X5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms