Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGB3Q9Y5G1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB3Q9Y5G1 AL353692.3-201ENST00000407031 1396 ntBASIC16.64■□□□□ 0.26
PCDHGB3Q9Y5G1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PCDHGB3Q9Y5G1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PCDHGB3Q9Y5G1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 CROCCP2-202ENST00000412962 2773 ntBASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 AC011676.5-201ENST00000624864 2660 ntBASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB3Q9Y5G1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 DDX43P3-201ENST00000441064 443 ntBASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 BX276092.5-203ENST00000456199 560 ntBASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 KRT8P26-201ENST00000534154 1276 ntBASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 KRT126P-201ENST00000549467 1181 ntBASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 NPAP1P7-201ENST00000613027 823 ntBASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB3Q9Y5G1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms