Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB7Q9Y5E2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB7Q9Y5E2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 AC090164.3-201ENST00000610780 2143 ntBASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 CYMP-203ENST00000474680 1263 ntBASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 TNXA-203ENST00000507684 2038 ntBASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB7Q9Y5E2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 LINC02084-201ENST00000606069 1096 ntBASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 AC091812.2-201ENST00000619081 385 ntBASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 AL135999.2-201ENST00000622438 1686 ntBASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 AC046185.3-201ENST00000623228 1824 ntBASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDHB7Q9Y5E2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 AP000344.2-201ENST00000512987 629 ntBASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHB7Q9Y5E2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms