Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 AL354751.1-201ENST00000412768 1863 ntBASIC18.19■□□□□ 0.5
YIPF1Q9Y548 AC211486.1-202ENST00000416371 468 ntBASIC18.19■□□□□ 0.5
YIPF1Q9Y548 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 AC211476.1-201ENST00000503899 468 ntBASIC18.19■□□□□ 0.5
YIPF1Q9Y548 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 AC005829.1-201ENST00000570002 483 ntBASIC18.19■□□□□ 0.5
YIPF1Q9Y548 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 LINC00304-203ENST00000565008 1864 ntBASIC18.18■□□□□ 0.5
YIPF1Q9Y548 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 DNAJB3-202ENST00000449667 1266 ntBASIC18.18■□□□□ 0.5
YIPF1Q9Y548 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 AL078644.1-201ENST00000609881 752 ntBASIC18.18■□□□□ 0.5
YIPF1Q9Y548 AC004877.2-201ENST00000623941 599 ntBASIC18.18■□□□□ 0.5
YIPF1Q9Y548 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 BCAR1-209ENST00000546196 1340 ntBASIC18.18■□□□□ 0.5
YIPF1Q9Y548 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF1Q9Y548 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 AP006288.1-201ENST00000446065 395 ntBASIC18.17■□□□□ 0.5
YIPF1Q9Y548 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 YBX1P5-201ENST00000509441 847 ntBASIC18.17■□□□□ 0.5
YIPF1Q9Y548 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 PDPK2P-202ENST00000562415 1191 ntBASIC18.17■□□□□ 0.5
YIPF1Q9Y548 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 MIR4469-201ENST00000583919 79 ntBASIC18.17■□□□□ 0.5
YIPF1Q9Y548 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 C20orf181-201ENST00000623918 480 ntBASIC18.17■□□□□ 0.5
YIPF1Q9Y548 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 BCL2-203ENST00000589955 5011 ntBASIC18.17■□□□□ 0.5
YIPF1Q9Y548 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF1Q9Y548 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
YIPF1Q9Y548 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF1Q9Y548 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF1Q9Y548 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.16■□□□□ 0.5
YIPF1Q9Y548 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF1Q9Y548 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms