Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HPS5Q9UPZ3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HPS5Q9UPZ3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HPS5Q9UPZ3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
HPS5Q9UPZ3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.82■□□□□ 0.92
HPS5Q9UPZ3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HPS5Q9UPZ3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 LINC00304-203ENST00000565008 1864 ntBASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 PP12613-201ENST00000424958 2230 ntBASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 AC096633.1-201ENST00000422446 749 ntBASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HPS5Q9UPZ3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 AL356309.3-201ENST00000624132 1934 ntBASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 DDX43P3-201ENST00000441064 443 ntBASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 AC064836.3-201ENST00000607928 673 ntBASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 AC010460.3-201ENST00000511359 1579 ntBASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS5Q9UPZ3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
HPS5Q9UPZ3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 INTS4P1-201ENST00000438455 1935 ntBASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms