Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC055876.3-201ENST00000431496 288 ntBASIC16.56■□□□□ 0.24
LHX6Q9UPM6 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 MTCL1P1-201ENST00000446207 792 ntBASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC015911.4-201ENST00000588022 1070 ntBASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC138649.4-201ENST00000612222 287 ntBASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC004877.2-201ENST00000623941 599 ntBASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC090340.1-201ENST00000620778 4980 ntBASIC16.56■□□□□ 0.24
LHX6Q9UPM6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 BCAR1-209ENST00000546196 1340 ntBASIC16.55■□□□□ 0.24
LHX6Q9UPM6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 AC008687.5-201ENST00000593746 558 ntBASIC16.55■□□□□ 0.24
LHX6Q9UPM6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 AC079776.2-201ENST00000641154 1609 ntBASIC16.55■□□□□ 0.24
LHX6Q9UPM6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX6Q9UPM6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 AC009102.3-201ENST00000623118 1491 ntBASIC16.54■□□□□ 0.24
LHX6Q9UPM6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 AC040160.2-201ENST00000623816 1675 ntBASIC16.54■□□□□ 0.24
LHX6Q9UPM6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 AL109620.1-201ENST00000618738 1197 ntBASIC16.54■□□□□ 0.24
LHX6Q9UPM6 AC091812.2-201ENST00000619081 385 ntBASIC16.54■□□□□ 0.24
LHX6Q9UPM6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LHX6Q9UPM6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms