Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 MEIS3P1-201ENST00000495167 958 ntBASIC17.31■□□□□ 0.36
NCDNQ9UBB6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCDNQ9UBB6 AL138781.2-201ENST00000617896 1843 ntBASIC17.31■□□□□ 0.36
NCDNQ9UBB6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 CXCL1P1-201ENST00000502804 216 ntBASIC17.3■□□□□ 0.36
NCDNQ9UBB6 IGHV3-42-201ENST00000520410 361 ntBASIC17.3■□□□□ 0.36
NCDNQ9UBB6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCDNQ9UBB6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 TUBB3P1-201ENST00000405796 1332 ntBASIC17.29■□□□□ 0.36
NCDNQ9UBB6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 MIR661-201ENST00000384842 89 ntBASIC17.29■□□□□ 0.36
NCDNQ9UBB6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 KLF2P3-201ENST00000451977 1087 ntBASIC17.29■□□□□ 0.36
NCDNQ9UBB6 AL512638.1-201ENST00000457493 794 ntBASIC17.29■□□□□ 0.36
NCDNQ9UBB6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 AP005018.1-201ENST00000525475 301 ntBASIC17.29■□□□□ 0.36
NCDNQ9UBB6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCDNQ9UBB6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 AC006116.8-202ENST00000587620 1550 ntBASIC17.28■□□□□ 0.36
NCDNQ9UBB6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 SIRPAP1-201ENST00000448467 1770 ntBASIC17.28■□□□□ 0.36
NCDNQ9UBB6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 AC107890.1-201ENST00000422478 521 ntBASIC17.28■□□□□ 0.36
NCDNQ9UBB6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.28■□□□□ 0.36
NCDNQ9UBB6 OR7E47P-204ENST00000575924 449 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms