Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 STK25P1-201ENST00000585406 838 ntBASIC16.06■□□□□ 0.16
LRFN1Q9P244 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 AC005593.1-201ENST00000624894 515 ntBASIC16.06■□□□□ 0.16
LRFN1Q9P244 PGM5P2-202ENST00000637225 1043 ntBASIC16.06■□□□□ 0.16
LRFN1Q9P244 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 NEFHP1-201ENST00000412845 2629 ntBASIC16.06■□□□□ 0.16
LRFN1Q9P244 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 AC002558.1-201ENST00000488906 803 ntBASIC16.05■□□□□ 0.16
LRFN1Q9P244 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 UNC93B6-202ENST00000528242 690 ntBASIC16.05■□□□□ 0.16
LRFN1Q9P244 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 AC027601.4-201ENST00000611259 610 ntBASIC16.05■□□□□ 0.16
LRFN1Q9P244 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LRFN1Q9P244 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN1Q9P244 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 NCF1C-201ENST00000438382 1427 ntBASIC16.04■□□□□ 0.16
LRFN1Q9P244 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 MYCLP1-201ENST00000372451 1075 ntBASIC16.04■□□□□ 0.16
LRFN1Q9P244 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 KRT18P27-201ENST00000427733 1299 ntBASIC16.04■□□□□ 0.16
LRFN1Q9P244 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 AC136632.2-201ENST00000512891 861 ntBASIC16.04■□□□□ 0.16
LRFN1Q9P244 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 AC034105.1-201ENST00000563488 319 ntBASIC16.04■□□□□ 0.16
LRFN1Q9P244 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRFN1Q9P244 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.04■□□□□ 0.16
LRFN1Q9P244 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms