Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPHK1Q9NYA1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.85■□□□□ 0.29
SPHK1Q9NYA1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPHK1Q9NYA1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.85■□□□□ 0.29
SPHK1Q9NYA1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.85■□□□□ 0.29
SPHK1Q9NYA1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPHK1Q9NYA1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPHK1Q9NYA1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.85■□□□□ 0.29
SPHK1Q9NYA1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPHK1Q9NYA1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 AL031284.1-201ENST00000419297 478 ntBASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 PRYP5-201ENST00000451909 266 ntBASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 SIGLEC30P-201ENST00000455569 941 ntBASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 AC079776.4-201ENST00000511039 504 ntBASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 AC064862.7-201ENST00000604520 867 ntBASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPHK1Q9NYA1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPHK1Q9NYA1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPHK1Q9NYA1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 LTB4R2-202ENST00000528054 3092 ntBASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 AC046185.3-201ENST00000623228 1824 ntBASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 FAM215A-202ENST00000632077 792 ntBASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPHK1Q9NYA1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 OR7E14P-202ENST00000530490 1290 ntBASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 AP001005.1-201ENST00000571755 1248 ntBASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 MIR7706-201ENST00000613747 67 ntBASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms