Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 AC010507.1-201ENST00000633895 436 ntBASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 AC012317.2-201ENST00000623305 2251 ntBASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 FAM58CP-201ENST00000435741 640 ntBASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 AC004877.2-201ENST00000623941 599 ntBASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.48■□□□□ 0.71
PDLIM7Q9NR12 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 AC092474.2-201ENST00000424288 719 ntBASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 PAWRP1-201ENST00000451083 565 ntBASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 KRT19P2-202ENST00000557173 1012 ntBASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 STK25P1-201ENST00000585406 838 ntBASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 NCF1C-201ENST00000438382 1427 ntBASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM7Q9NR12 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 ACTG1P14-201ENST00000446382 1122 ntBASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 AC004449.1-201ENST00000564240 433 ntBASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 AC010654.1-201ENST00000615722 808 ntBASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 BCAR1-209ENST00000546196 1340 ntBASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.46■□□□□ 0.71
PDLIM7Q9NR12 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms