Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 POU5F1P3-201ENST00000428824 1078 ntBASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 PRSS44-201ENST00000515154 1146 ntBASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 AC060834.1-201ENST00000443027 2032 ntBASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 AL365203.3-201ENST00000609742 2057 ntBASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCX3AQ9NNX9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 DUX4L16-201ENST00000555130 1264 ntBASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 AC079328.2-201ENST00000561241 3354 ntBASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
VCX3AQ9NNX9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VCX3AQ9NNX9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VCX3AQ9NNX9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VCX3AQ9NNX9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VCX3AQ9NNX9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VCX3AQ9NNX9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.34■□□□□ 0.21
VCX3AQ9NNX9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VCX3AQ9NNX9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.34■□□□□ 0.21
VCX3AQ9NNX9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VCX3AQ9NNX9 AL161772.1-201ENST00000610494 4412 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms