Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 AL133373.2-201ENST00000623187 2828 ntBASIC20.35■□□□□ 0.85
SH2D4AQ9H788 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 YBX2P1-201ENST00000394192 760 ntBASIC20.35■□□□□ 0.85
SH2D4AQ9H788 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.35■□□□□ 0.85
SH2D4AQ9H788 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 AL353135.1-201ENST00000606729 504 ntBASIC20.35■□□□□ 0.85
SH2D4AQ9H788 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2D4AQ9H788 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 LINC00982-205ENST00000420957 435 ntBASIC20.34■□□□□ 0.85
SH2D4AQ9H788 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 GPX1P2-201ENST00000429271 606 ntBASIC20.34■□□□□ 0.85
SH2D4AQ9H788 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH2D4AQ9H788 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 VN2R19P-201ENST00000442399 1052 ntBASIC20.33■□□□□ 0.85
SH2D4AQ9H788 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.33■□□□□ 0.85
SH2D4AQ9H788 AC010327.4-202ENST00000591484 748 ntBASIC20.33■□□□□ 0.85
SH2D4AQ9H788 GGTLC5P-201ENST00000617623 998 ntBASIC20.33■□□□□ 0.85
SH2D4AQ9H788 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.33■□□□□ 0.85
SH2D4AQ9H788 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SH2D4AQ9H788 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH2D4AQ9H788 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH2D4AQ9H788 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH2D4AQ9H788 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SH2D4AQ9H788 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH2D4AQ9H788 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.32■□□□□ 0.84
SH2D4AQ9H788 AP002414.1-201ENST00000391405 1147 ntBASIC20.32■□□□□ 0.84
SH2D4AQ9H788 RPSAP43-201ENST00000402237 625 ntBASIC20.32■□□□□ 0.84
SH2D4AQ9H788 ACTG1P4-201ENST00000425123 1122 ntBASIC20.32■□□□□ 0.84
SH2D4AQ9H788 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms