Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 MTCL1P1-201ENST00000446207 792 ntBASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 TERF1P1-201ENST00000311003 1181 ntBASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 AC068472.1-201ENST00000474589 881 ntBASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 AC106886.4-201ENST00000623557 2502 ntBASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.18■□□□□ 0.18
POLR2J3Q9H1A7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 AC139887.4-201ENST00000607877 719 ntBASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms