Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 HNRNPDP1-201ENST00000439535 754 ntBASIC19.23■□□□□ 0.67
TRIM6Q9C030 DDX43P3-201ENST00000441064 443 ntBASIC19.23■□□□□ 0.67
TRIM6Q9C030 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 AC139887.3-201ENST00000568585 713 ntBASIC19.23■□□□□ 0.67
TRIM6Q9C030 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 MTDHP4-201ENST00000600287 670 ntBASIC19.23■□□□□ 0.67
TRIM6Q9C030 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 MIR7706-201ENST00000613747 67 ntBASIC19.23■□□□□ 0.67
TRIM6Q9C030 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 AC073592.5-201ENST00000624854 528 ntBASIC19.23■□□□□ 0.67
TRIM6Q9C030 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 AC079776.2-201ENST00000641154 1609 ntBASIC19.22■□□□□ 0.67
TRIM6Q9C030 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 BX005266.1-201ENST00000473402 457 ntBASIC19.22■□□□□ 0.67
TRIM6Q9C030 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 AL049840.3-201ENST00000602669 611 ntBASIC19.22■□□□□ 0.67
TRIM6Q9C030 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6Q9C030 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM6Q9C030 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6Q9C030 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6Q9C030 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6Q9C030 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6Q9C030 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6Q9C030 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6Q9C030 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 AC025062.2-201ENST00000605477 670 ntBASIC19.21■□□□□ 0.67
TRIM6Q9C030 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6Q9C030 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM6Q9C030 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms