Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 AL671277.1-201ENST00000429656 993 ntBASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 Z92544.3-201ENST00000624747 417 ntBASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11XQ9BZA7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 AL390955.2-201ENST00000603032 514 ntBASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 AL138781.2-201ENST00000617896 1843 ntBASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH11XQ9BZA7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PCDH11XQ9BZA7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 AC005237.2-201ENST00000434368 219 ntBASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 AC079140.1-201ENST00000508039 487 ntBASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 DUT-210ENST00000559935 569 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11XQ9BZA7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH11XQ9BZA7 BX323043.1-201ENST00000641006 1765 ntBASIC22.46■■□□□ 1.19
PCDH11XQ9BZA7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH11XQ9BZA7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH11XQ9BZA7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms