Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 AC005363.2-201ENST00000618631 242 ntBASIC10.47□□□□□ -0.73
LIMD2Q9BT23 AC073912.3-201ENST00000624414 853 ntBASIC10.47□□□□□ -0.73
LIMD2Q9BT23 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 AC093010.1-201ENST00000473625 1624 ntBASIC10.47□□□□□ -0.73
LIMD2Q9BT23 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 PHGDH-209ENST00000641074 1780 ntBASIC10.47□□□□□ -0.73
LIMD2Q9BT23 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 AL596275.1-201ENST00000423464 877 ntBASIC10.46□□□□□ -0.73
LIMD2Q9BT23 AL137013.1-201ENST00000432946 1228 ntBASIC10.46□□□□□ -0.73
LIMD2Q9BT23 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 COX11P1-201ENST00000489116 835 ntBASIC10.46□□□□□ -0.73
LIMD2Q9BT23 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 RPS20-210ENST00000523936 899 ntTSL 2 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 AC066615.1-201ENST00000640911 628 ntBASIC10.46□□□□□ -0.73
LIMD2Q9BT23 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
LIMD2Q9BT23 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 KRT8P9-201ENST00000558927 1449 ntBASIC10.46□□□□□ -0.74
LIMD2Q9BT23 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 AC012317.2-201ENST00000623305 2251 ntBASIC10.46□□□□□ -0.74
LIMD2Q9BT23 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LIMD2Q9BT23 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LIMD2Q9BT23 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms