Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.31■□□□□ 0.52
SMOQ99835 AC098831.1-202ENST00000438821 336 ntBASIC18.31■□□□□ 0.52
SMOQ99835 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.31■□□□□ 0.52
SMOQ99835 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.31■□□□□ 0.52
SMOQ99835 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.31■□□□□ 0.52
SMOQ99835 IGHV3-22-201ENST00000520721 359 ntBASIC18.31■□□□□ 0.52
SMOQ99835 SLC25A1P1-201ENST00000528351 927 ntBASIC18.31■□□□□ 0.52
SMOQ99835 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.31■□□□□ 0.52
SMOQ99835 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMOQ99835 AL353135.1-201ENST00000606729 504 ntBASIC18.31■□□□□ 0.52
SMOQ99835 AL139424.1-201ENST00000607572 797 ntBASIC18.31■□□□□ 0.52
SMOQ99835 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.31■□□□□ 0.52
SMOQ99835 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SMOQ99835 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SMOQ99835 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMOQ99835 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMOQ99835 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.3■□□□□ 0.52
SMOQ99835 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.3■□□□□ 0.52
SMOQ99835 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SMOQ99835 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.3■□□□□ 0.52
SMOQ99835 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.3■□□□□ 0.52
SMOQ99835 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.3■□□□□ 0.52
SMOQ99835 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SMOQ99835 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.3■□□□□ 0.52
SMOQ99835 AC117500.6-201ENST00000624871 588 ntBASIC18.3■□□□□ 0.52
SMOQ99835 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.3■□□□□ 0.52
SMOQ99835 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SMOQ99835 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMOQ99835 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.3■□□□□ 0.52
SMOQ99835 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
SMOQ99835 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SMOQ99835 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SMOQ99835 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SMOQ99835 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SMOQ99835 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.29■□□□□ 0.52
SMOQ99835 AL022342.1-201ENST00000400363 863 ntBASIC18.29■□□□□ 0.52
SMOQ99835 ACTG1P4-201ENST00000425123 1122 ntBASIC18.29■□□□□ 0.52
SMOQ99835 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.29■□□□□ 0.52
SMOQ99835 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.29■□□□□ 0.52
SMOQ99835 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.29■□□□□ 0.52
SMOQ99835 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.29■□□□□ 0.52
SMOQ99835 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SMOQ99835 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SMOQ99835 AL356488.2-201ENST00000602755 427 ntBASIC18.29■□□□□ 0.52
SMOQ99835 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.29■□□□□ 0.52
SMOQ99835 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.29■□□□□ 0.52
SMOQ99835 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMOQ99835 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SMOQ99835 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SMOQ99835 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SMOQ99835 LINC00896-202ENST00000609602 2128 ntBASIC18.28■□□□□ 0.52
SMOQ99835 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SMOQ99835 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.28■□□□□ 0.52
SMOQ99835 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.28■□□□□ 0.52
SMOQ99835 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.28■□□□□ 0.52
SMOQ99835 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.28■□□□□ 0.52
SMOQ99835 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.28■□□□□ 0.52
SMOQ99835 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMOQ99835 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SMOQ99835 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.28■□□□□ 0.52
SMOQ99835 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.28■□□□□ 0.52
SMOQ99835 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.28■□□□□ 0.52
SMOQ99835 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.28■□□□□ 0.52
SMOQ99835 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.28■□□□□ 0.52
SMOQ99835 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SMOQ99835 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms