Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 TPM4P1-201ENST00000436100 807 ntBASIC16.28■□□□□ 0.2
TM9SF2Q99805 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 NUS1P1-201ENST00000446295 882 ntBASIC16.28■□□□□ 0.2
TM9SF2Q99805 LINC00265-3P-201ENST00000447588 903 ntBASIC16.28■□□□□ 0.2
TM9SF2Q99805 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 TPSP2-201ENST00000561760 610 ntBASIC16.28■□□□□ 0.2
TM9SF2Q99805 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 NKILA-202ENST00000614771 2598 ntBASIC16.28■□□□□ 0.2
TM9SF2Q99805 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TM9SF2Q99805 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF2Q99805 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF2Q99805 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF2Q99805 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF2Q99805 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF2Q99805 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 CROCCP1-201ENST00000426910 5675 ntBASIC16.27■□□□□ 0.2
TM9SF2Q99805 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF2Q99805 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 AP000867.3-201ENST00000524675 377 ntBASIC16.27■□□□□ 0.2
TM9SF2Q99805 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 AC012615.1-201ENST00000565797 1299 ntBASIC16.27■□□□□ 0.2
TM9SF2Q99805 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 PHGDH-209ENST00000641074 1780 ntBASIC16.27■□□□□ 0.2
TM9SF2Q99805 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF2Q99805 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF2Q99805 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF2Q99805 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF2Q99805 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.27■□□□□ 0.19
TM9SF2Q99805 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF2Q99805 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF2Q99805 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF2Q99805 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.27■□□□□ 0.19
TM9SF2Q99805 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TM9SF2Q99805 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF2Q99805 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF2Q99805 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TM9SF2Q99805 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TM9SF2Q99805 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.26■□□□□ 0.19
TM9SF2Q99805 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.26■□□□□ 0.19
TM9SF2Q99805 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TM9SF2Q99805 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 TOB2P1-201ENST00000469761 992 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms