Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 AC092910.1-201ENST00000482027 1129 ntBASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 AC136632.2-201ENST00000512891 861 ntBASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 AL356488.2-201ENST00000602755 427 ntBASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 AL139424.1-201ENST00000607572 797 ntBASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 AC005593.1-201ENST00000624894 515 ntBASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 AC008764.6-201ENST00000595909 2069 ntBASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 AC097637.2-201ENST00000624096 1997 ntBASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 AC012317.2-201ENST00000623305 2251 ntBASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 AC012640.2-201ENST00000561606 901 ntBASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 ZNF259P1-201ENST00000407656 1365 ntBASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDK5RAP1Q96SZ6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 AC098831.1-202ENST00000438821 336 ntBASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 IGHV3-22-201ENST00000520721 359 ntBASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 LTB4R2-202ENST00000528054 3092 ntBASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.12■□□□□ 0.49
CDK5RAP1Q96SZ6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 RPL13AP23-201ENST00000480739 586 ntBASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 AC145285.3-201ENST00000564603 959 ntBASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms