Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 AL139384.1-201ENST00000612143 3047 ntBASIC16.66■□□□□ 0.26
LRRC58Q96CX6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 HMGA1P5-201ENST00000412453 271 ntBASIC16.65■□□□□ 0.26
LRRC58Q96CX6 AL596275.1-201ENST00000423464 877 ntBASIC16.65■□□□□ 0.26
LRRC58Q96CX6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 FAM87A-204ENST00000613235 858 ntBASIC16.65■□□□□ 0.26
LRRC58Q96CX6 AC004263.2-201ENST00000617183 678 ntBASIC16.65■□□□□ 0.26
LRRC58Q96CX6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 RNF216P1-203ENST00000404404 2427 ntBASIC16.65■□□□□ 0.26
LRRC58Q96CX6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
LRRC58Q96CX6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRRC58Q96CX6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRRC58Q96CX6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
LRRC58Q96CX6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LRRC58Q96CX6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 MIR718-201ENST00000390190 70 ntBASIC16.64■□□□□ 0.25
LRRC58Q96CX6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 TSPY12P-201ENST00000421279 868 ntBASIC16.64■□□□□ 0.25
LRRC58Q96CX6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 AL355075.4-201ENST00000554988 638 ntBASIC16.64■□□□□ 0.25
LRRC58Q96CX6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.64■□□□□ 0.25
LRRC58Q96CX6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 AC010947.1-201ENST00000623454 693 ntBASIC16.64■□□□□ 0.25
LRRC58Q96CX6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC58Q96CX6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms