Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC012313.1-201ENST00000593393 3059 ntBASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 AL031133.1-201ENST00000406807 723 ntBASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 NTF6B-201ENST00000591913 560 ntBASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP1Q8TDR0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 FAM210CP-201ENST00000445714 574 ntBASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 BX276092.5-203ENST00000456199 560 ntBASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 RN7SL606P-201ENST00000472779 293 ntBASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 AC010460.3-201ENST00000511359 1579 ntBASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP1Q8TDR0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 COX5BP2-201ENST00000392354 334 ntBASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 VENTXP7-201ENST00000475503 772 ntBASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 AC087388.1-201ENST00000571370 1112 ntBASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 AL121672.3-201ENST00000608644 468 ntBASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP1Q8TDR0 AC005332.1-201ENST00000577698 1310 ntBASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 LYSMD4-203ENST00000378904 2122 ntBASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms