Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 DDX43P3-201ENST00000441064 443 ntBASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 FAM197Y8-203ENST00000450145 560 ntBASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 FGFR3P6-201ENST00000457012 610 ntBASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
FNDC9Q8TBE3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 MRPL3P1-201ENST00000400109 1033 ntBASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.77■□□□□ 0.12
FNDC9Q8TBE3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
FNDC9Q8TBE3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
FNDC9Q8TBE3 BX276092.7-203ENST00000637198 1536 ntBASIC15.77■□□□□ 0.11
FNDC9Q8TBE3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
FNDC9Q8TBE3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
FNDC9Q8TBE3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FNDC9Q8TBE3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FNDC9Q8TBE3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
FNDC9Q8TBE3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.77■□□□□ 0.11
FNDC9Q8TBE3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FNDC9Q8TBE3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 AC103564.2-201ENST00000432853 1299 ntBASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 SCARNA2-201ENST00000458748 420 ntBASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 SLC25A6P4-201ENST00000586535 553 ntBASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 AP000867.4-201ENST00000641616 219 ntBASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 AC067852.2-201ENST00000590513 2313 ntBASIC15.76■□□□□ 0.11
FNDC9Q8TBE3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FNDC9Q8TBE3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms