Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 AC006504.4-201ENST00000592118 1568 ntBASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 AC109462.3-201ENST00000573934 613 ntBASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 AC064836.3-201ENST00000607928 673 ntBASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 AC008764.6-201ENST00000595909 2069 ntBASIC18.34■□□□□ 0.53
SHKBP1Q8TBC3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 AC009949.1-201ENST00000623048 1830 ntBASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.33■□□□□ 0.53
SHKBP1Q8TBC3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 AC003669.1-201ENST00000334569 611 ntBASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 AC023274.1-201ENST00000418278 595 ntBASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHKBP1Q8TBC3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 AC004832.2-201ENST00000426397 482 ntBASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 AC112482.1-201ENST00000492080 688 ntBASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms