Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 IFNL4P1-201ENST00000607083 540 ntBASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 RBM17P3-201ENST00000417687 1192 ntBASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC148Q8NFR7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 LYSMD4-203ENST00000378904 2122 ntBASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 AC106795.1-205ENST00000512851 1056 ntBASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 AP001269.4-201ENST00000609611 512 ntBASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 REXO1L6P-202ENST00000619970 1078 ntBASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 AC132938.5-201ENST00000624980 1813 ntBASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC148Q8NFR7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC148Q8NFR7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.82
CCDC148Q8NFR7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 AP005117.1-201ENST00000584346 1413 ntBASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 STK19B-204ENST00000512515 211 ntBASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC148Q8NFR7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms