Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.12□□□□□ -0.31
NUP35Q8NFH5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NUP35Q8NFH5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP35Q8NFH5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP35Q8NFH5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP35Q8NFH5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP35Q8NFH5 KRT8P7-201ENST00000533003 1432 ntBASIC13.12□□□□□ -0.31
NUP35Q8NFH5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP35Q8NFH5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP35Q8NFH5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP35Q8NFH5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP35Q8NFH5 AC005052.1-201ENST00000625181 2492 ntBASIC13.12□□□□□ -0.31
NUP35Q8NFH5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 SLC29A4P1-201ENST00000398760 971 ntBASIC13.11□□□□□ -0.31
NUP35Q8NFH5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 AC022517.1-201ENST00000592429 346 ntBASIC13.11□□□□□ -0.31
NUP35Q8NFH5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 AC083880.1-201ENST00000608266 535 ntBASIC13.11□□□□□ -0.31
NUP35Q8NFH5 AC130371.2-201ENST00000619443 611 ntBASIC13.11□□□□□ -0.31
NUP35Q8NFH5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP35Q8NFH5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.1□□□□□ -0.31
NUP35Q8NFH5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 MTDHP1-201ENST00000605323 784 ntBASIC13.1□□□□□ -0.31
NUP35Q8NFH5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP35Q8NFH5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms