Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CYMP-203ENST00000474680 1263 ntBASIC21.44■■□□□ 1.02
RTL9Q8NET4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.44■■□□□ 1.02
RTL9Q8NET4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
RTL9Q8NET4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.44■■□□□ 1.02
RTL9Q8NET4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.43■■□□□ 1.02
RTL9Q8NET4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.43■■□□□ 1.02
RTL9Q8NET4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RTL9Q8NET4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RTL9Q8NET4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.43■■□□□ 1.02
RTL9Q8NET4 KRT19P2-202ENST00000557173 1012 ntBASIC21.43■■□□□ 1.02
RTL9Q8NET4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.43■■□□□ 1.02
RTL9Q8NET4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
RTL9Q8NET4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.43■■□□□ 1.02
RTL9Q8NET4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.43■■□□□ 1.02
RTL9Q8NET4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.43■■□□□ 1.02
RTL9Q8NET4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL9Q8NET4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL9Q8NET4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL9Q8NET4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTL9Q8NET4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTL9Q8NET4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL9Q8NET4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL9Q8NET4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTL9Q8NET4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTL9Q8NET4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTL9Q8NET4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.42■■□□□ 1.02
RTL9Q8NET4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL9Q8NET4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL9Q8NET4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL9Q8NET4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 AL078644.1-201ENST00000609881 752 ntBASIC21.41■■□□□ 1.02
RTL9Q8NET4 AC004877.2-201ENST00000623941 599 ntBASIC21.41■■□□□ 1.02
RTL9Q8NET4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL9Q8NET4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL9Q8NET4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL9Q8NET4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL9Q8NET4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL9Q8NET4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.41■■□□□ 1.02
RTL9Q8NET4 PI4KAP1-204ENST00000612579 1703 ntBASIC21.4■■□□□ 1.02
RTL9Q8NET4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 AC254562.1-201ENST00000417586 456 ntBASIC21.4■■□□□ 1.02
RTL9Q8NET4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms